fetchGit: fix submodule corner case by fetching all refs from cacheDir

Due to fetchGit not checking if rev is an ancestor of ref (there is even
a FIXME comment about it in the code), the cache repo might not have the
ref even though it has the rev. This doesn't matter when submodule =
false, but the submodule = true code blows up because it tries to fetch
the (missing) ref from the cache repo.

Fix this in the simplest way possible: fetch all refs from the local
cache repo when submodules = true.

TODO: Add tests.

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